JGOFS Integrated Water Column Chemical Data Format Document for COOKBOOK cruises August 2, 2005 University of Hawaii at Manoa 1000 Pope Road Honolulu, Hawaii 96822 JGOFS water column chemical data are distributed as ASCII flat files. An entire cruise's data is contained in one file (e.g., cb1intg.gof contains the 0-100m integrated data from COOKBOOK-1). Note that these files contain all of the chemistry data. The details of the analytical methods used to determine all of the parameters listed here can be found in the Hawaii Ocean Time-series Program Data Report(s). The files are self-explanatory; one column is written for each measured parameter. Missing data are filled with -9. A five-line heading labels each column. Variables having asterisks in their heading have a quality flag associated with them. These quality flags are concatenated as a quality word which are listed as the last 4 variables in each row. The values each digit can assume and their meanings follows: Quality Indicators: Flag Meaning 1 not quality controled 2 good data 3 suspect (i.e. questionable) data 4 bad data 5 missing data 9 variable not measured during this cast Data Record Format: Column Format Item 1- 8 i3 Station Number 9- 16 i3 Cast Number 17- 24 i3 Replicate Number 25- 32 f7.3 Latitude [Degrees North] 33- 40 f7.3 Longitude [Degrees West] 41- 48 f6.1 Particulate Carbon (PC) [mg/m2] 49- 56 f6.1 Particulate Nitrogen (PN) [mg/m2] 57- 64 f6.2 Particulate Phosphate (PP) [mg/m2] 65- 72 f6.2 Fluorometric Chlorophyll a (Chl a.) [mg/m2] 73- 80 f6.2 Pheopigments (Pheo) [mg/m2] 81- 88 f6.2 TD700 Chlorophyll a (TD700A) [mg/m2] 89- 96 f6.2 TD700 Chlorophyll b (TD700B) [mg/m2] 97-104 f6.2 TD700 Chlorophyll c (TD700C) [mg/m2] 105-112 f6.2 Phycoerythrin .4u fraction (PE .4u) [mg/m2] 113-120 f6.2 Phycoerythrin 5u fraction (PE 5u) [mg/m2] 121-128 f6.2 Phycoerythrin 10u fraction (PE 10u) [mg/m2] 129-136 f6.2 HPLC Chlorophyll c1 + c2 + c3 (Chl+) [mg/m2] 137-144 f6.2 HPLC Peridinin (Peridino) [mg/m2] 145-152 f6.2 HPLC 19'-Butanoyloxyfucoxanthin (19 But) [mg/m2] 153-160 f6.2 HPLC Fucoxanthin (Fuco) [mg/m2] 161-168 f6.2 HPLC 19'-Hexanoyloxyfucoxanthin (19 Hex) [mg/m2] 169-176 f6.2 HPLC Violaxanthin (Viol) [mg/m2] 177-184 f6.2 HPLC Diadinoxanthin (Diadino) [mg/m2] 185-192 f6.2 HPLC Alloxanthin (Allox) [mg/m2] 193-200 f6.2 HPLC Lutein (Lutein) [mg/m2] 201-208 f6.2 HPLC Zeaxanthin (Zeaxan) [mg/m2] 209-216 f6.2 HPLC Chlorophyll b (Chl b) [mg/m2] 217-224 f6.2 HPLC Alpha Carotene (A.Car) [mg/m2] 225-232 f6.2 HPLC Beta Carotene (B.Car) [mg/m2] 233-240 f6.2 HPLC Divinyl Chlorophyll a (DV.Chla) [mg/m2] 241-248 f6.2 HPLC Monovinyl Chlorophyll a (MV.Chla) [mg/m2] 249-256 f6.2 HPLC Chlorophyll a (HPLCchl) [mg/m2] 257-254 f6.2 Adenosine 5'-Triphosphate (ATP) [mg/m2] 257-263 a7 Quality flags for PC - TD700B 265-271 a7 Quality flags for TD700C - PERID 273-279 a7 Quality flags for 19-BUT - ZEAXAN 281-287 a7 Quality flags for CHL B - ATP